24 December 2025 The Future is the Product of the Past

An Anthropologist’s life work uncovers the first ancient DNA from the Swahili Civilization

Chapurukha Kusimba, an anthropologist at the University of South Florida, has uncovered the first ancient DNA from the Swahili Civilization, prosperous trading states on the East African coast dating back to the 7th century.

From Kenya to Mozambique, Chapurukha Kusimba, a USF professor of anthropology, dedicated 40 years to studying the ancestry of those who built the civilizations.

The urban peoples of the Swahili coast traded across eastern Africa and the Indian Ocean and were among the first practitioners of Islam among sub-Saharan people.

A common language of African origin (Kiswahili), a shared dominant religion (Islam), and a geographic distribution in coastal towns and villages were the defining characteristics of the Swahili culture of eastern Africa during the Middle Ages and Early Modern Period beginning in the seventh century AD.

Published in Nature, this work examines the DNA of 80 individuals from as long as 800 years ago – making it the first ancient DNA uncovered from the Swahili Civilization. 



📣 Our WhatsApp channel is now LIVE! Stay up-to-date with the latest news and updates, just click here to follow us on WhatsApp and never miss a thing!!



The site of tombs along the Swahili Coast
The site of tombs along the Swahili Coast

“This research has been my life’s work – this journey to recover the past of the Swahili and restore them to rightful citizenship,” Kusimba said. “These findings bring out the African contributions, and indeed, the Africanness of the Swahili, without marginalizing the Persian and Indian connection.”

As part of his decades-long research, Kusimba, a Kenya native, spent time with the people of Swahili to gain their trust before receiving their approval to complete cemetery excavations. To respect the remains, Kusimba finished the sampling and re-burial process all in one season.

Working alongside Harvard geneticists David Reich and Esther Brielle and corresponding authors, Jeff Fleisher from Rice University and Stephanie Wynne-Jones from University of York, Kusimba discovered the ancestry of the people analyzed was both African and Asian. The DNA revealed a pattern: the overwhelming majority of male-line ancestors came from Asia, while the female-line ancestors came from Africa.

Despite their intermarrying, descendants spoke an African language, not an Asian one. This led researchers to conclude that African women had great influence on the formation of the culture. So much so, the villages were established prior to the colonialism from Asia, making women the primary holders of economic and social power.

The findings challenge centuries-old narratives – constructed by other African natives – that suggest wealthier Swahilis did not have real ancestral connections to Asia and only claimed they did in order to minimize their African heritage to obtain higher social status and cultural affinities. Despite the vital role Swahilis played in trade between Africa and the rest of the Indian Ocean world for more than 2,500 years, Kusimba’s previous work from the 1990s documented the poor treatment of Swahili descent communities as a result of the narratives.

University of South Florida anthropologist Chapurukha Kusimba (right) sits aboard a Swahili coastal boat beside longtime colleague Mohamed Mchulla Mohamed, curator emeritus of the National Museums of Kenya. Photo: Chapurukha Kusimba, University of South Florida
University of South Florida anthropologist Chapurukha Kusimba (right) sits aboard a Swahili coastal boat beside longtime colleague Mohamed Mchulla Mohamed, curator emeritus of the National Museums of Kenya. Photo: Chapurukha Kusimba, University of South Florida

“I believe I was among many scholars who had worked on the Kenyan coast who did not think that the story from Persia was much more than that – a story,” said Dillon Mahoney, USF assistant professor and volunteer who works with recently resettled Swahili-speaking refugees.

“This research is not only significant for its scientific achievement, but it tells us that we must take non-Western and oral histories into full consideration, because our ancestry research is tending to support such stories, even if generations of academics have largely viewed such stories with skepticism.”

The results from this work prove Asians and African ancestors began intermarrying at least 1,000 years ago, but long after Africans had already established their villages. 

“Our results do not provide simple validation for the narratives previously advanced in archaeological, historical or political circles,” Kusimba said. “Instead, they contradict and complicate those narratives.”

By challenging and overturning the narratives imposed from the outside for political and economic ends, this research brings peace and restores pride to the millions of people who identify as Swahili today. Up until now, it has been difficult to determine how people who identify as Swahili today relate to people of the early modern Swahili culture.

University of South Florida

doi.org/10.1038/s41586-023-05754

Related Articles

Earthquake Unearthed Lost Roman Odeon in Croatia

28 May 2025

28 May 2025

An extraordinary archaeological discovery emerged in Croatia after renovation work began on Sisak’s City Hall, damaged by a 6.4-magnitude earthquake...

Medieval Secrets Revealed: Archaeologists Discover Reading Stone Beneath World-Famous University

30 October 2025

30 October 2025

Archaeologists at Oxford uncover a perfectly preserved medieval reading stone alongside ancient halls, manuscripts, and artifacts that shed new light...

1300-year-old baby footprints found in excavations at the ancient city of Assos in western Turkey

3 September 2021

3 September 2021

1300 years ago, a baby stepped on baked bricks prepared to make a bread baking oven. The baby was probably...

Glazed Bricks with Bull and Dragon Motifs Discovered at Persepolis

17 December 2021

17 December 2021

A team of Iranian and Italian archaeologists recently unearthed some glazed bricks bearing bull and dragon motifs in the ancient...

For the first time, a Viking Age grave rich in artifacts has been found in Norway’s capital city, Oslo

23 December 2022

23 December 2022

A Viking Age grave rich in artifacts has been discovered for the first time in Norway’s capital city, Oslo. The...

A stone statue (Balbal) with height up to 3 meters found in the Issyk-Kul region of Kyrgyzstan

18 October 2022

18 October 2022

A balbal (stone statue) with a height of up to 3 meters was found during agricultural work in the Ak-Bulun...

Will the Siloam Inscription be returned to Israel?

12 March 2022

12 March 2022

During the visit of Israeli President Isaac Herzog to Turkey, the claim that he wanted the Siloam Inscription, one of...

‘Miniature Pompeii’ found beneath Astra cinema in Verona

15 June 2021

15 June 2021

Archaeologists have uncovered a “miniature Pompeii” in the shape of a well-preserved ancient edifice near Verona, Italy. An old Roman...

Archaeologists reveal 4,000-year-old rock-cut tomb, artifacts in Saqqara

8 January 2024

8 January 2024

A team of Egyptian and Japanese archaeologists has unveiled a rock-cut tomb believed to be more than 4,000 years old...

A collection of 430 burial objects found in the tomb of a 3000-year-old Noblewoman in China

11 April 2024

11 April 2024

A tomb belonging to a noblewoman dating back about 3,000 years has been unearthed in North China’s Shanxi Province. The...

Sicilian Seas Yield Rare Roman Helmet from 241 BC Naval Clash

5 September 2025

5 September 2025

In a remarkable underwater archaeological recovery that highlights Sicily’s rich cultural heritage, a bronze Montefortino‐type helmet was retrieved from the...

The discovery of great importance for Urartian archeology in Çavuştepe castle: Discovered a horse skeleton with a bronze curb bit in its jaw

28 September 2023

28 September 2023

Archaeologists unearthed a horse skeleton with a bronze curb bit (a metal piece inserted into its mouth to guide the...

Iron Age and Roman Skeletons Discovered on Alderney

19 May 2021

19 May 2021

Well-preserved skeletons from the late Iron Age and Roman periods were found in Alderney, one of the channel islands. The...

2,300-year-old Punic tomb complex found during works on car park for staff

26 October 2024

26 October 2024

A 2,300-year-old Punic tomb was discovered during work in a car park near Mater Dei Hospital in Msida, Malta. The...

Kevenli Castle Reveals Van’s Largest Ancient Urartian Storage Center – 76 Pithoi Marked with Cuneiform Measurements Found

7 September 2025

7 September 2025

Excavations at the ruins of Kevenli Castle in Van’s İpekyolu district have brought to light the largest known storage center...